Are there any alternative names?
CLN7 disease, variant late-infantile may also be referred to as variant late-infantile CLN7 disease, alongside Variant Late Infantile Neuronal Ceroid Lipofuscinosis, and Variant Late-Infantile Batten Disease.
What specifically causes CLN7 disease?
CLN7 disease is caused by mutations in the CLN7 gene, which is found on chromosome 4. The gene was discovered to be the cause of disease in 2007 and there are more than 88 mutations known to cause this type of Batten disease.
The CLN7 gene is responsible for producing the protein MFSD8, which is found in the cell membrane of lysosomes. Researchers are still finding out more about MFSD8 does. It is likely that the protein transports molecules across the lysosomal membrane but the specific molecules it moves have yet to be identified. Whatever the normal function of the protein, when it is mutated, the lysosomes cannot recycle material correctly and there is build-up of material inside cells that stops them working properly. Neurons (nerve cells) are particularly vulnerable to the damage caused and, over time, this leads to symptoms associated with CLN7 disease.
How are NCLs inherited?
Most forms of NCL are bi-allelic disorders where the inheritance "autosomal recessive". This is one of several ways that a trait, disorder, or disease can be passed down through families. An autosomal recessive disorder means that both copies of the gene are abnormal (one inherited from each parent) with neither working properly. The parent (or a sibling) carrying only one abnormal gene is healthy because the second copy of the gene is still working. The disease does not depend on the sex of an individual.
What are the chances of inheriting CLN7 disease?
CLN7 disease is inherited as an autosomal recessive disorder, which means that both chromosomes carry mutations in the CLN7 gene. Therefore, both biological parents of a child with this diagnosis will be carriers of the disease but physically unaffected by it.
A child born to parents who both carry the autosomal recessive mutation in the CLN7 gene has a 25% (1 in 4) chance of inheriting the abnormal malfunctioning genes from both parents and developing CLN7 disease. They will have a 50% (1 in 2) chance of inheriting one abnormal gene, which would make them a carrier who is unaffected by the disease. There is a 25% (1 in 4) chance of the child being born with two normal genes and therefore being non-affected (not a carrier).

When it is known that both parents are carriers of the abnormal gene, and a child is already known to be unaffected, we refer to there being a 2 in 3 chance of a child being a carrier. With any pregnancy, the probability of a child inheriting one or both genes from their parents is the same each time, irrespective of any sibling's status.
How is it diagnosed?
Children will probably have been seen by a paediatrician and paediatric neurologist, because of symptoms such as seizures. A number of investigations will have been done to look for the cause of the seizures.
The diagnosis of CLN7 disease is usually made by genetic tests, looking at lots of genes at the same time, all of which are known to cause the same type of symptoms as Batten disease. A blood or saliva sample will be taken to extract DNA from the cells for the test. Genetic testing is recommended to identify the exact mutations or mistakes in the CLN5 gene.
In the past, before the NCL genes were identified, blood or skin cells were looked at using an electron microscope to see the abnormal storage bodies in the cells. These can have characteristic patterns, depending on the type of NCL.
How common is it?
Approximately 1 - 2 children are diagnosed with CLN7 disease each year in the UK. We estimate there are currently less than 10 affected children in the UK. Children have been diagnosed with this condition in many countries and from a variety of ethnic backgrounds.
What are the symptoms and how does the disease progress?
Usually, the affected individual appears to be healthy and develop normally until symptoms start. There are various differences in terms of the age of onset and the progression of each genetic variant. Each variant will have a usual age range where symptoms start to appear although individuals may be described as atypical onset if they become symptomatic outside of the normal age range.

Children appear to be healthy and develop normally for the first few years of life. Children with CLN7 disease can be very different from each other, making the disease course difficult to predict in individual cases. The first symptoms may be apparent early on in life, though might not be evident until after school entry. Developmental progress may begin to slow down, and some children will be delayed in the development of their language skills. Challenging behaviour may be seen at an early stage, before other symptoms and so it is often only linked to the disease after diagnosis is made.
Usually, the onset of epilepsy will take place between 3 and 7 years of age. The seizures may be varying in nature and include drops, vacant spells (absences) or motor seizures with violent jerking of the limbs and loss of consciousness. Initially, seizures may be successfully managed with medication, yet they will always recur and often become difficult to control.
Children tend to become unsteady on their feet and may frequently fall. Gradually, skills related to walking, playing and speech are lost with children becoming less able and increasingly dependent.
Later children with CLN7 disease usually have myoclonic (rapid involuntary muscle spasm) jerks of their limbs and are prone to erratic movements of their head (nods). They may have difficulty sleeping and often become distressed around this time, usually without obvious reason. Their vision gradually deteriorates, with its loss being ultimately inevitable.
The nature of the disease means that children will become completely dependent on families and carers for all of their daily needs, however the rate of progression to this state can vary significantly between individuals (the period between 9 - 11 years of age often sees rapid advancement of symptoms). In order to ensure they receive adequate nutrition; they will require a specialist feeding tube (gastrostomy). There will be noticeable stiffening of their arms and legs, whilst some children become prone to frequent chest infections.
Sadly, most children who have CLN7 disease die during late childhood or their teenage years, though there are exceptions.
Are there any treatments?
Currently there is no cure for CLN7 disease and therefore specialist symptom management and therapy are essential to assist in maintaining a good quality of life for children and their families. Holistic support for parents, siblings and wider family members is extremely important throughout their journey.
Epilepsy can be difficult to treat and therefore attaining complete control of seizures is not always possible. Antiepileptic medications will be necessary from the early stages of the disease process.
Myoclonic jerks (involuntary muscle spasms) are common, though should not be confused with epileptic seizures. They can interfere with rest and sleep as well as being distressing for children and their families. Along with spasticity (unusually tight or stiff muscles), these symptoms can be managed with different medications.
Various professionals including doctors, nurses, physiotherapists, occupational therapists and speech and language therapists should be involved in the care of children with CLN7 disease. They will work collaboratively and in conjunction with the family to provide a holistic approach to care.
Support and treatment will be needed for a range of issues including progressive difficulties with chewing and swallowing, constipation, hydration, respiratory function, oral secretions, motor disorder and sleep disturbance. Attention to posture, seating, skin and mouth care is essential and children will require additional nutritional support that will include consideration of a gastrostomy.
What research is being done?
Research into possible methods for treating the disease is ongoing with various theoretical approaches being considered and investigated.
Gene therapy for CLN7 disease is being investigated, which aims to introduce a copy of the defective gene into cells so that they can then produce a correct functioning protein.
Researchers in the UK and worldwide are researching potential drugs which may alleviate some of the symptoms of the disease or slow its progression.
For updates and information regarding developments in research please visit the BDFA website: www.bdfa-uk.org.uk or contact the BDFA Family Support and Advocacy team via 0800 046 9832. Email: support@bdfa-uk.org.uk
Are there any clinical trials looking into CLN7 disease?
There are currently two observational studies that are investigating the natural history of CLN7 disease. NCT01873924 is a study based in Rochester, USA and NCT04613089 is a study in Hamburg, Germany. While these are not investigating treatments, they are important studies for future trials as they provide valuable information on how Batten disease progresses over time. If you are considering participating in a clinical trial, please contact us at the BDFA. The information for these clinical trials can be found on: https://clinicaltrials.gov/ct2/home.
There is a phase 1 (safety) trial ongoing that has used a single administration of a gene therapy agent in 4 CLN7 children (NCT04737460), however the recruitment is paused at the moment.
What are the genetic considerations?
The age that CLN7 disease is usually diagnosed in a child means that some families will have younger siblings who may be affected but have not displayed any symptoms. Older unaffected siblings may be carriers of the abnormal gene and may want to think about their family choices when they are older, such as the risk of their children having CLN7 disease. When only one parent is a carrier of the abnormal gene, and the other is non-affected, there is no chance a child will be affected, and a 50% (1 in 2) chance that any child will be an unaffected carrier like their parent.

If parents who already have an affected child are considering having additional children, they can access specialist advice and support from their local clinical genetics service following a referral from their GP. Prenatal testing may be possible in the early stages of any future pregnancy.
Is support available to families?
As soon as possible following a diagnosis of CLN7 disease, families should be offered support from various professionals attached to their local health, social, educational services and the BDFA Support and Advocacy Team. Ideally a "Team Around the Child" will be formed, with one of the professionals appointed as a Keyworker for the family.
The child's needs should be discussed with the parents and assessed by the team. The team will work together to ensure that the child and family receive the on-going care and support they need and that their choices are considered.
A child and family's needs will inevitably change as the disease progresses. As such, it is often helpful if a clear process for regular planned reviews is identified and that a system is established for enabling additional reviews as and when they are deemed necessary. As the rate or pattern of the progression of the disease for each child can vary, an individualised plan of care and support is essential.
How can families manage the financial challenges?
Caring for a child with CLN7 disease will bring additional financial challenges. It is vital that families are well informed about the full level of economic assistance available and the support that they are entitled to. They may well need help and guidance in accessing benefits and other sources of assistance. The professionals and services supporting the family should provide advice and guidance. The BDFA can also support families with these issues in various ways, the Small Grants Scheme being one example.
What are the practical implications for the family?
As the disease progresses, specialist equipment and aids will become necessary, and this is another area where the family will need help. Items are likely to include specialist seating, buggies/wheelchairs, bathing and toileting aids, hoisting equipment and a specialist bed/mattress. Professionals will play a key role in ensuring that these and other items are provided in a timely manner following proper assessment of the individual child's needs.
It is likely that changes will be needed in the home environment to enable the family to appropriately care for a child with CLN7 disease. These may include installing ramps, widening doorways and providing suitable floor surfaces. A purpose-built wet room with a specialist bath or shower is commonly needed and there are various other aspects that will require consideration.
There are grants and funds available to ensure that the work involved is affordable. An occupational therapist will consult on all aspects of any adaptations and assist the family in undertaking this process.
Will there be an impact on the child's education?
Education will continue to be important for the child and family and there will be many aspects that require consideration and significant assistance from those around them.
The Children and Families Act 2014 came into force in September 2014. The introduction of the 0-25 Education, Health and Care Plan should help children, young people and families affected by NCL. Education, Health and Care (EHC) Plans will gradually replace Statements of Special Educational Needs.
Children who do not yet have a Statement will have a statutory Education, Health and Care Needs assessment. An EHC Plan will be drawn up that is personalised to meet the education, health and care needs of the child.
It remains probable that many parents will continue to need guidance, understanding and support when trying to navigate the process of statutory assessment and the drawing up of the EHC Plan.
In what other ways can families be supported?
The realities of caring for a child who has variant late-infantile CLN7 disease can place enormous strain on a family, both physical and emotional. It will impact upon all members in numerous ways and so being made aware that support is available to groups and individuals to help with the challenges that will be faced is important. This support extends to wider family members and step-relatives.
There are several options to consider should families wish to explore ways of maximising the limited time available to share with their children. Contacting a charitable wish granting organisation may lead to them being able to create some valuable and significant memories.
It may also be appropriate for a referral to be made to a local children's hospice service, as this can offer an additional experienced and skilled source of holistic support.
Contributors- BDFA Head of Scientific Affairs, Professor Paul Gissen, Clinical Professor of Paediatric Metabolic Medicine, Professor Sara Mole, Professor of Molecular Cell Biology, Genetics & Genomic Medicine.
Some of the information contained in this leaflet is based upon chapters in "The Neuronal Ceroid Lipofuscinoses (Batten Disease) 2nd Edition" by Mole, Williams & Goebel (Eds), Oxford University Press 2011, and is used with permission.